Pneumocystis jirovecii pneumonia (PJP) 

— formerly known as Pneumocystis carinii pneumonia (PCP) — is a life-threatening opportunistic fungal infection that primarily affects immunocompromised hosts, especially those with HIV/AIDS, malignancy, organ transplantation, or on long-term immunosuppressive therapy.

Although Pneumocystis jirovecii is classified as a fungus, it behaves more like an atypical protozoan, being unresponsive to antifungal drugs such as amphotericin B or azoles.


 MICROBIOLOGY

  • Organism: Pneumocystis jirovecii (human-specific; formerly P. carinii)
  • Classification: Fungal (based on rRNA sequencing)
  • Reservoir: Humans (no animal or environmental reservoir)
  • Transmission: Airborne person-to-person spread (likely via inhalation)


 EPIDEMIOLOGY

  • Ubiquitous organism: >80% of humans develop antibodies by age 3–4 years.
  • Reactivation or reinfection occurs in immunocompromised states.

Common at-risk groups:

Population

Risk Factors

HIV/AIDS

CD4 <200 cells/µL, prior PJP, thrush, weight loss

Transplant recipients

Corticosteroids, calcineurin inhibitors

Malignancy

Especially hematologic (leukemia, lymphoma)

Immunosuppressive drugs

Prednisone >20 mg/day for >1 month, TNF-α inhibitors, methotrexate, cyclophosphamide

Others

Malnutrition, premature infants, connective tissue disorders on immunosuppression


 PATHOGENESIS

  • P. jirovecii attaches to type I alveolar epithelial cells damages alveolar-capillary membrane.
  • Foamy eosinophilic exudate fills alveoli impairs gas exchange.
  • Diffuse interstitial pneumonitis develops.
  • CD4+ T-cell–mediated immunity is crucial for clearance; deficiency leads to uncontrolled proliferation.


 CLINICAL FEATURES

1. Symptom Onset

  • Subacute (1–4 weeks) in HIV patients.
  • Acute fulminant course in non-HIV immunocompromised (e.g., transplant).

2. Symptoms

  • Progressive dyspnea (especially on exertion)
  • Nonproductive cough
  • Fever, malaise, fatigue
  • Pleuritic chest pain (occasionally)
  • Hypoxemia disproportionate to clinical findings.

3. Signs

  • Tachypnea, tachycardia
  • Fine end-inspiratory crackles
  • Cyanosis (advanced disease)
  • May be minimal auscultatory findings despite severe hypoxia.


 LABORATORY FINDINGS

Test

Findings

ABG

Hypoxemia (A–a gradient)

LDH

Elevated (>500 IU/L) — nonspecific but supportive

β-D-glucan

Elevated (>80 pg/mL) – a fungal cell wall marker

CBC

Normal or lymphopenia (especially in HIV)

CD4 count (HIV)

<200 cells/µL (high risk)


🩻 RADIOLOGICAL FEATURES

1. Chest X-ray

  • Bilateral diffuse interstitial infiltrates (ground-glass pattern)
  • May progress to alveolar consolidation
  • Cystic lesions / pneumatoceles in some patients (predispose to pneumothorax)

2. HRCT Chest

  • Ground-glass opacities (predominantly perihilar)
  • Crazy-paving pattern (GGO + septal thickening)
  • Cysts / pneumatoceles common in AIDS-related PJP
  • May show mosaic attenuation in early disease


 DIAGNOSIS

Diagnosis requires microscopic identification of the organism or molecular confirmation.

1. Specimen collection

  • Induced sputum (sensitivity ~50–90%)
  • BAL fluid (gold standard; sensitivity >95%)
  • Transbronchial / open lung biopsy if diagnosis uncertain

2. Stains

Stain

Detects

Appearance

Gomori methenamine silver (GMS)

Cyst wall

Black, crushed ping-pong ball cysts

Toluidine blue / Calcofluor white

Cyst wall

Fluorescent

Giemsa / Wright stain

Trophozoites

Small, blue, dot-like

Immunofluorescence (IFA)

Antigen detection

Most sensitive & specific

3. PCR-based assays

  • High sensitivity; useful in low fungal burden
  • Quantitative PCR differentiates colonization from active infection


 TREATMENT

1. First-line therapy

Trimethoprim–sulfamethoxazole (TMP–SMX)

  • Dosage: TMP 15–20 mg/kg/day + SMX 75–100 mg/kg/day IV or PO in 3–4 divided doses
  • Duration:
    • 21 days (HIV-related)
    • 14 days (non-HIV immunocompromised)

Switch to oral therapy when clinically improved.


2. Adjunctive corticosteroids (for HIV-related PJP)

Indicated when:

  • PaO₂ <70 mmHg on room air, or
  • A–a gradient >35 mmHg

Prednisone regimen:

  • Day 1–5: 40 mg BID
  • Day 6–10: 40 mg OD
  • Day 11–21: 20 mg OD
    (Alternatively, IV methylprednisolone 75% equivalent if unable to take orally)

Rationale: Reduces risk of respiratory failure and mortality.


3. Alternative regimens

Regimen

Indication

Notes

Pentamidine IV 4 mg/kg/day

Sulfa allergy or intolerance

Nephrotoxic, hypoglycemia, pancreatitis, arrhythmias

Clindamycin (600 mg q6h) + Primaquine (15–30 mg daily)

Effective alternative

Check G6PD before primaquine

Atovaquone 750 mg PO BID

Mild–moderate disease, oral only

Fewer side effects

TMP + Dapsone

Mild disease, alternative for prophylaxis too

Check G6PD deficiency


 PROPHYLAXIS

Indications:

  • HIV: CD4 <200 cells/µL or oropharyngeal candidiasis
  • Transplant / malignancy / immunosuppression: Prednisone ≥20 mg/day >4 weeks or equivalent
  • Prior PJP episode

Regimens:

Agent

Dosage

Comments

TMP–SMX (preferred)

1 DS tab daily or 3x/week

Also protects vs. toxoplasmosis

Dapsone

100 mg daily

For sulfa-allergic, G6PD check

Atovaquone

1500 mg daily with food

Tolerated but expensive

Aerosolized pentamidine

300 mg monthly

Less effective for extrapulmonary PJP

Prophylaxis discontinued when CD4 >200 cells/µL for >3 months on ART.


 COMPLICATIONS

  • Pneumothorax (from rupture of cysts)
  • ARDS
  • Respiratory failure requiring mechanical ventilation
  • Relapse if prophylaxis not maintained
  • Drug toxicity (sulfa rash, hepatitis, cytopenias, nephrotoxicity)


 DIFFERENTIAL DIAGNOSIS

  • CMV pneumonitis
  • Bacterial pneumonia (esp. Legionella)
  • Viral pneumonitis (influenza, RSV)
  • Fungal pneumonia (Aspergillus, Histoplasma)
  • Noninfectious interstitial pneumonitis (drug-induced, radiation)


 PROGNOSIS

Population

Mortality

HIV-related PJP

10–20%

Non-HIV immunocompromised

30–60%

Early diagnosis, adequate therapy, and corticosteroids improve survival.